Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c18/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c18
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c18
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c18_obs_pval_signal float

liu2026Multiomics_Stomach_c18_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Stomach_c18_obs_pval_signal [0, 1.03e+03]
n
3,087,222,179
mean
0.395
sd
1.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308722217996.20% 23135519
chr1 248946288 >99.99% 2300603
chr2 242183333 >99.99% 1750666
chr3 198179170 99.94% 1399114
chr4 190203653 99.99% 988131
chr5 181477733 99.97% 1092461
chr6 170737590 99.96% 1245246
chr7 159335742 99.99% 1106800
chr8 145078535 99.96% 894617
chr9 138300485 99.93% 1024276
chr10 133787445 99.99% 1084673
chr11 135076501 99.99% 1311489
chr12 133264750 99.99% 1106145
chr13 114353928 99.99% 484627
chr14 106883648 99.85% 791600
chr15 101981028 99.99% 727216
chr16 90224741 99.87% 933739
chr17 83247259 99.99% 1323286
chr18 80263248 99.86% 404879
chr19 58607600 99.98% 1299363
chr20 64333018 99.83% 640561
chr21 46699946 99.98% 285150
chr22 50808458 99.98% 631207
chrX 156030780 99.99% 299838
chrY 57217300 99.98% 9832
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23135519 1 30005639 133.44 17
global segment-length histogram

Files

Filename Size md5
Stomach_c18__obs_pval_signal.bw 133.99 MB 68358c86d1a437a1480d31021241bc24
genomic_resource.yaml 1.25 KB dcb5a89515adfbe944e8319d34d73a8c
statistics/