Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c19/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c19 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c19_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c19_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.001, 3.47] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 28215338 | 0.88% | 28215325 |
| chr1 | 2881754 | 1.16% | 2881753 |
| chr2 | 2091840 | 0.86% | 2091839 |
| chr3 | 1654832 | 0.83% | 1654830 |
| chr4 | 1023061 | 0.54% | 1023060 |
| chr5 | 1301510 | 0.72% | 1301509 |
| chr6 | 1716124 | 1.00% | 1716124 |
| chr7 | 1348081 | 0.85% | 1348080 |
| chr8 | 1082625 | 0.75% | 1082625 |
| chr9 | 1184189 | 0.86% | 1184189 |
| chr10 | 1301428 | 0.97% | 1301427 |
| chr11 | 1494417 | 1.11% | 1494417 |
| chr12 | 1465674 | 1.10% | 1465673 |
| chr13 | 553959 | 0.48% | 553959 |
| chr14 | 922589 | 0.86% | 922588 |
| chr15 | 892495 | 0.88% | 892494 |
| chr16 | 1107299 | 1.23% | 1107299 |
| chr17 | 1627034 | 1.95% | 1627034 |
| chr18 | 471739 | 0.59% | 471739 |
| chr19 | 1742454 | 2.97% | 1742454 |
| chr20 | 763727 | 1.19% | 763726 |
| chr21 | 292176 | 0.63% | 292176 |
| chr22 | 665051 | 1.31% | 665050 |
| chrX | 620229 | 0.40% | 620229 |
| chrY | 11051 | 0.02% | 11051 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 28215325 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c19__mean_pred_corrected.bw | 214.44 MB | 98ffd6d91319020d757d0306ee72fcf5 |
| genomic_resource.yaml | 1.29 KB | d3adbe065e84353bd34ff8ce27b42ffd |
| statistics/ |
