Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c19/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c19
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c19
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c19_obs_pval_signal float

liu2026Multiomics_Stomach_c19_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c19_obs_pval_signal [0.00014, 422]
n
3,087,055,961
mean
0.71
sd
0.465

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308705596196.19% 6438358
chr1 248946444 >99.99% 617635
chr2 242171057 99.99% 479497
chr3 198220350 99.96% 372317
chr4 190123069 99.95% 232627
chr5 181473715 99.96% 300327
chr6 170736820 99.96% 359143
chr7 159334524 99.99% 305927
chr8 145075964 99.96% 235830
chr9 138220664 99.87% 279164
chr10 133787435 99.99% 293689
chr11 135076072 99.99% 359611
chr12 133262412 99.99% 328633
chr13 114353145 99.99% 124538
chr14 106883576 99.85% 212802
chr15 101981042 99.99% 206342
chr16 90207606 99.86% 271061
chr17 83247258 99.99% 405284
chr18 80263247 99.86% 110369
chr19 58606809 99.98% 413399
chr20 64329780 99.82% 185313
chr21 46699966 99.98% 81409
chr22 50807028 99.98% 174127
chrX 156030774 99.99% 88477
chrY 57217204 99.98% 837
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 6438358 1 30014329 479.48 49
global segment-length histogram

Files

Filename Size md5
Stomach_c19__obs_pval_signal.bw 36.23 MB fc2c565887aa5ef906bb3b6ffda9f34d
genomic_resource.yaml 1.25 KB ec4ea1b0c1bae2dad2385c3aedaeb393
statistics/