Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c2/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c2 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c2_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c2_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.000171, 60.7] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 97845884 | 3.05% | 97844412 |
| chr1 | 9479579 | 3.81% | 9479576 |
| chr2 | 7728460 | 3.19% | 7728454 |
| chr3 | 6224763 | 3.14% | 6224756 |
| chr4 | 4505096 | 2.37% | 4505092 |
| chr5 | 5088069 | 2.80% | 5088068 |
| chr6 | 5760766 | 3.37% | 5760764 |
| chr7 | 4981103 | 3.13% | 4981103 |
| chr8 | 4171349 | 2.87% | 4171349 |
| chr9 | 4310473 | 3.11% | 4310469 |
| chr10 | 4798986 | 3.59% | 4798985 |
| chr11 | 5271494 | 3.90% | 5271491 |
| chr12 | 4788715 | 3.59% | 4788712 |
| chr13 | 2409381 | 2.11% | 2409381 |
| chr14 | 3170149 | 2.96% | 3170148 |
| chr15 | 3257685 | 3.19% | 3257683 |
| chr16 | 3435328 | 3.80% | 3435327 |
| chr17 | 4578960 | 5.50% | 4578957 |
| chr18 | 1923659 | 2.39% | 1923659 |
| chr19 | 3831750 | 6.54% | 3831749 |
| chr20 | 2696257 | 4.18% | 2696256 |
| chr21 | 1165223 | 2.49% | 1165221 |
| chr22 | 1988138 | 3.91% | 1988137 |
| chrX | 2248298 | 1.44% | 2248297 |
| chrY | 32203 | 0.06% | 30778 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 97844412 | 1 | 1399 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c2__mean_pred_corrected.bw | 739.95 MB | 442694f0494e27279f7fb550e4683739 |
| genomic_resource.yaml | 1.28 KB | d1f507e7ca0238a63cc2f45c516af649 |
| statistics/ |
