Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c2/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c2_obs_pval_signal float

liu2026Multiomics_Stomach_c2_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c2_obs_pval_signal [0, 9.36e+03]
n
3,087,307,643
mean
0.518
sd
7.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308730764396.20% 117305389
chr1 248946462 >99.99% 10747039
chr2 242183500 >99.99% 9154919
chr3 198220350 99.96% 7496439
chr4 190204543 99.99% 5880136
chr5 181477761 99.97% 6215928
chr6 170743265 99.96% 6494707
chr7 159335959 99.99% 6077724
chr8 145078519 99.96% 5034187
chr9 138334537 99.96% 5237445
chr10 133787440 99.99% 5542513
chr11 135076624 99.99% 6304906
chr12 133265010 99.99% 5807236
chr13 114354206 99.99% 3058613
chr14 106883681 99.85% 3852550
chr15 101981162 99.99% 3666626
chr16 90226423 99.88% 4301097
chr17 83247354 99.99% 5458765
chr18 80263248 99.86% 2457264
chr19 58607601 99.98% 4662896
chr20 64333473 99.83% 3089254
chr21 46699977 99.98% 1477819
chr22 50808344 99.98% 2653255
chrX 156030838 99.99% 2582514
chrY 57217366 99.98% 51557
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 117305389 1 30002601 26.32 8
global segment-length histogram

Files

Filename Size md5
Stomach_c2__obs_pval_signal.bw 670.73 MB fed2ed54573a5857abe03be3fe215955
genomic_resource.yaml 1.24 KB 94e190a6e940aa60bb41d0a62cd1445c
statistics/