Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c20/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c20 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c20_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c20_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00114, 2.58] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 38480750 | 1.20% | 38480736 |
| chr1 | 3675345 | 1.48% | 3675345 |
| chr2 | 3062523 | 1.26% | 3062522 |
| chr3 | 2493631 | 1.26% | 2493630 |
| chr4 | 1786161 | 0.94% | 1786160 |
| chr5 | 2008978 | 1.11% | 2008977 |
| chr6 | 2292328 | 1.34% | 2292327 |
| chr7 | 2002524 | 1.26% | 2002524 |
| chr8 | 1635917 | 1.13% | 1635916 |
| chr9 | 1646796 | 1.19% | 1646796 |
| chr10 | 1727182 | 1.29% | 1727181 |
| chr11 | 2082889 | 1.54% | 2082888 |
| chr12 | 1915866 | 1.44% | 1915865 |
| chr13 | 941207 | 0.82% | 941206 |
| chr14 | 1220981 | 1.14% | 1220981 |
| chr15 | 1200765 | 1.18% | 1200763 |
| chr16 | 1362869 | 1.51% | 1362869 |
| chr17 | 1802074 | 2.16% | 1802074 |
| chr18 | 752882 | 0.94% | 752882 |
| chr19 | 1804717 | 3.08% | 1804716 |
| chr20 | 1012706 | 1.57% | 1012706 |
| chr21 | 431674 | 0.92% | 431674 |
| chr22 | 725862 | 1.43% | 725862 |
| chrX | 879936 | 0.56% | 879935 |
| chrY | 14937 | 0.03% | 14937 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 38480736 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c20__mean_pred_corrected.bw | 292.13 MB | f2665c52812a7572ffa0849ee28115e0 |
| genomic_resource.yaml | 1.29 KB | eacad42874c7c8b5dbce94772e06cf0a |
| statistics/ |
