Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c21/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c21
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c21
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c21_obs_pval_signal float

liu2026Multiomics_Stomach_c21_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c21_obs_pval_signal [0.00022, 335]
n
3,086,947,899
mean
0.839
sd
0.323

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308694789996.19% 3623153
chr1 248946131 >99.99% 347732
chr2 242171509 99.99% 276599
chr3 198187843 99.95% 220195
chr4 190203749 99.99% 169794
chr5 181311807 99.88% 178980
chr6 170740443 99.96% 200392
chr7 159335360 99.99% 182072
chr8 145074807 99.96% 152436
chr9 138220790 99.87% 166163
chr10 133787427 99.99% 169983
chr11 135075524 99.99% 208590
chr12 133264103 99.99% 180149
chr13 114353014 99.99% 77782
chr14 106883496 99.85% 113594
chr15 101980867 99.99% 106246
chr16 90215558 99.86% 148700
chr17 83237966 99.98% 194098
chr18 80263216 99.86% 70372
chr19 58607538 99.98% 198859
chr20 64332693 99.83% 94189
chr21 46699638 99.98% 38537
chr22 50807202 99.98% 76219
chrX 156030349 99.99% 51247
chrY 57216869 99.98% 225
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3623153 1 35592888 852.01 106
global segment-length histogram

Files

Filename Size md5
Stomach_c21__obs_pval_signal.bw 20.14 MB 1ab39fc0e82ef2f8967f26d6b4d9892a
genomic_resource.yaml 1.25 KB d8b06bf0fd57bd5385e8046d0f82655b
statistics/