Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c3/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c3_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c3_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.000648, 48.4] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 93793139 | 2.92% | 93792150 |
| chr1 | 9087281 | 3.65% | 9087276 |
| chr2 | 7515417 | 3.10% | 7515412 |
| chr3 | 5999462 | 3.03% | 5999458 |
| chr4 | 4497948 | 2.36% | 4497945 |
| chr5 | 4846454 | 2.67% | 4846451 |
| chr6 | 5437853 | 3.18% | 5437850 |
| chr7 | 4814683 | 3.02% | 4814680 |
| chr8 | 3959367 | 2.73% | 3959366 |
| chr9 | 4087957 | 2.95% | 4087954 |
| chr10 | 4317949 | 3.23% | 4317947 |
| chr11 | 5099641 | 3.78% | 5099634 |
| chr12 | 4545641 | 3.41% | 4545641 |
| chr13 | 2361233 | 2.06% | 2361233 |
| chr14 | 3108164 | 2.90% | 3108164 |
| chr15 | 3031111 | 2.97% | 3031110 |
| chr16 | 3236609 | 3.58% | 3236606 |
| chr17 | 4350442 | 5.23% | 4350441 |
| chr18 | 1923231 | 2.39% | 1923229 |
| chr19 | 3770799 | 6.43% | 3770795 |
| chr20 | 2448553 | 3.80% | 2448552 |
| chr21 | 1056437 | 2.26% | 1056437 |
| chr22 | 1885613 | 3.71% | 1885612 |
| chrX | 2376526 | 1.52% | 2376523 |
| chrY | 34768 | 0.06% | 33834 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 93792150 | 1 | 911 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c3__mean_pred_corrected.bw | 709.58 MB | 6f2b860277b84c0d7ca1af8365a362be |
| genomic_resource.yaml | 1.28 KB | 836f573c7217ea1b22ee4cf2d96fa4d0 |
| statistics/ |
