Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c3/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c3_obs_pval_signal float

liu2026Multiomics_Stomach_c3_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c3_obs_pval_signal [0, 4.19e+03]
n
3,087,207,930
mean
0.451
sd
5.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308720793096.20% 93149841
chr1 248946468 >99.99% 8944487
chr2 242183501 >99.99% 7138755
chr3 198220287 99.96% 5880985
chr4 190204519 99.99% 4459135
chr5 181476504 99.97% 4824259
chr6 170742133 99.96% 5022697
chr7 159335945 99.99% 4707259
chr8 145078372 99.96% 3845851
chr9 138237381 99.89% 4107415
chr10 133787445 99.99% 4181726
chr11 135076572 99.99% 4943781
chr12 133264956 99.99% 4512623
chr13 114353995 99.99% 2374625
chr14 106883743 99.85% 3144913
chr15 101981161 99.99% 2932946
chr16 90226289 99.88% 3512068
chr17 83247366 99.99% 4525665
chr18 80263247 99.86% 1874218
chr19 58607600 99.98% 4078086
chr20 64333922 99.83% 2510885
chr21 46699977 99.98% 1205932
chr22 50808344 99.98% 2221854
chrX 156030839 99.99% 2145279
chrY 57217364 99.98% 54397
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93149841 1 30004489 33.14 8
global segment-length histogram

Files

Filename Size md5
Stomach_c3__obs_pval_signal.bw 548.21 MB 146707ba3a84dc91fc28a5348421298d
genomic_resource.yaml 1.24 KB 91877c591eab0c8405ce0e6d178de005
statistics/