Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c4/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c4_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c4_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00285, 25.7] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 104870371 | 3.27% | 104870280 |
| chr1 | 10079982 | 4.05% | 10079971 |
| chr2 | 8538410 | 3.53% | 8538400 |
| chr3 | 6872308 | 3.47% | 6872305 |
| chr4 | 5045147 | 2.65% | 5045141 |
| chr5 | 5253579 | 2.89% | 5253578 |
| chr6 | 6532300 | 3.82% | 6532298 |
| chr7 | 5284456 | 3.32% | 5284450 |
| chr8 | 4498582 | 3.10% | 4498579 |
| chr9 | 4583731 | 3.31% | 4583728 |
| chr10 | 4807596 | 3.59% | 4807589 |
| chr11 | 5561626 | 4.12% | 5561624 |
| chr12 | 5164203 | 3.87% | 5164199 |
| chr13 | 2586024 | 2.26% | 2586021 |
| chr14 | 3350457 | 3.13% | 3350455 |
| chr15 | 3481471 | 3.41% | 3481467 |
| chr16 | 3451270 | 3.82% | 3451267 |
| chr17 | 4744978 | 5.70% | 4744974 |
| chr18 | 2273816 | 2.83% | 2273813 |
| chr19 | 3923116 | 6.69% | 3923111 |
| chr20 | 2816358 | 4.37% | 2816355 |
| chr21 | 1405959 | 3.01% | 1405957 |
| chr22 | 2105686 | 4.14% | 2105682 |
| chrX | 2355923 | 1.51% | 2355923 |
| chrY | 153393 | 0.27% | 153393 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 104870280 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c4__mean_pred_corrected.bw | 794.6 MB | 680442146eebe67c7121ca6b0b5eee1f |
| genomic_resource.yaml | 1.28 KB | 63b9382b4f6192562a12c5460a306b63 |
| statistics/ |
