Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c4/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c4_obs_pval_signal float

liu2026Multiomics_Stomach_c4_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c4_obs_pval_signal [0, 3.45e+03]
n
3,087,263,305
mean
0.459
sd
5.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308726330596.20% 62596348
chr1 248946456 >99.99% 6040118
chr2 242183501 >99.99% 4639231
chr3 198182628 99.94% 3838630
chr4 190204571 99.99% 2698681
chr5 181477751 99.97% 2821173
chr6 170741638 99.96% 3566128
chr7 159335893 99.99% 2989931
chr8 145075858 99.96% 2470944
chr9 138334416 99.96% 2853117
chr10 133787439 99.99% 2786424
chr11 135076642 99.99% 3409731
chr12 133265010 99.99% 3024471
chr13 114354030 99.99% 1406013
chr14 106883722 99.85% 2097661
chr15 101981143 99.99% 1995865
chr16 90225616 99.88% 2362932
chr17 83247260 99.99% 3548473
chr18 80263240 99.86% 1247881
chr19 58607600 99.98% 3237494
chr20 64332321 99.83% 1855295
chr21 46699959 99.98% 976513
chr22 50808458 99.98% 1723641
chrX 156030786 99.99% 950506
chrY 57217367 99.98% 55495
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62596348 1 29998538 49.32 9
global segment-length histogram

Files

Filename Size md5
Stomach_c4__obs_pval_signal.bw 368.82 MB ff9be3d1378cb5fd459c9a4cba7f6cdf
genomic_resource.yaml 1.24 KB fffb6e0bc0f876cb555a27460d9abc06
statistics/