Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c5/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c5 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c5_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c5_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.0033, 20.5] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 68604799 | 2.14% | 68603854 |
| chr1 | 6645944 | 2.67% | 6645942 |
| chr2 | 5367134 | 2.22% | 5367134 |
| chr3 | 4135642 | 2.09% | 4135641 |
| chr4 | 3027233 | 1.59% | 3027232 |
| chr5 | 3529307 | 1.94% | 3529306 |
| chr6 | 3971212 | 2.32% | 3971211 |
| chr7 | 3502533 | 2.20% | 3502533 |
| chr8 | 2903727 | 2.00% | 2903726 |
| chr9 | 3041150 | 2.20% | 3041148 |
| chr10 | 3314514 | 2.48% | 3314513 |
| chr11 | 3782021 | 2.80% | 3782020 |
| chr12 | 3259615 | 2.45% | 3259615 |
| chr13 | 1535260 | 1.34% | 1535260 |
| chr14 | 2211461 | 2.07% | 2211459 |
| chr15 | 2303830 | 2.26% | 2303829 |
| chr16 | 2504263 | 2.77% | 2504263 |
| chr17 | 3427730 | 4.12% | 3427730 |
| chr18 | 1353356 | 1.68% | 1353356 |
| chr19 | 3042966 | 5.19% | 3042965 |
| chr20 | 1886938 | 2.93% | 1886938 |
| chr21 | 787452 | 1.69% | 787452 |
| chr22 | 1451980 | 2.86% | 1451980 |
| chrX | 1602986 | 1.03% | 1602986 |
| chrY | 16545 | 0.03% | 15615 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 68603854 | 1 | 547 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c5__mean_pred_corrected.bw | 518.65 MB | d2770abffb6c14cc6a53920f1976e255 |
| genomic_resource.yaml | 1.28 KB | e57a3222973afcd5c5666ba2fdd8bff1 |
| statistics/ |
