Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c5/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c5_obs_pval_signal float

liu2026Multiomics_Stomach_c5_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c5_obs_pval_signal [0, 2.67e+03]
n
3,087,237,002
mean
0.469
sd
2.73

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308723700296.20% 79098132
chr1 248946463 >99.99% 7109572
chr2 242183501 >99.99% 6376136
chr3 198215441 99.96% 5109796
chr4 190204147 99.99% 4174703
chr5 181477313 99.97% 4430887
chr6 170743419 99.96% 4520081
chr7 159335929 99.99% 4216266
chr8 145075901 99.96% 3561235
chr9 138272949 99.91% 3511018
chr10 133787439 99.99% 3642778
chr11 135076609 99.99% 4244429
chr12 133264905 99.99% 3805118
chr13 114354193 99.99% 2120565
chr14 106883596 99.85% 2552919
chr15 101981161 99.99% 2297780
chr16 90226367 99.88% 2788722
chr17 83247390 99.99% 3385432
chr18 80263246 99.86% 1741027
chr19 58607600 99.98% 3024332
chr20 64332970 99.83% 1975305
chr21 46699971 99.98% 919268
chr22 50808344 99.98% 1541373
chrX 156030782 99.99% 2010079
chrY 57217366 99.98% 39311
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 79098132 1 30002606 39.03 13
global segment-length histogram

Files

Filename Size md5
Stomach_c5__obs_pval_signal.bw 459.94 MB 411ba83c9cb97a38f05542dd58a1b869
genomic_resource.yaml 1.24 KB 3cece251cad7693b36476987249047eb
statistics/