Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c6/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c6 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c6_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c6_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
![]() |
[-0.0647, 0.154] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 155544734 | 4.85% | 154453964 |
| chr1 | 14726544 | 5.92% | 14623859 |
| chr2 | 12632028 | 5.22% | 12543847 |
| chr3 | 10203238 | 5.15% | 10130504 |
| chr4 | 7774943 | 4.09% | 7717855 |
| chr5 | 8783460 | 4.84% | 8721742 |
| chr6 | 9512359 | 5.57% | 9445798 |
| chr7 | 7892743 | 4.95% | 7836125 |
| chr8 | 7211578 | 4.97% | 7161036 |
| chr9 | 6617854 | 4.78% | 6572364 |
| chr10 | 7942205 | 5.94% | 7887711 |
| chr11 | 8011373 | 5.93% | 7956611 |
| chr12 | 7577060 | 5.69% | 7524726 |
| chr13 | 3946993 | 3.45% | 3918599 |
| chr14 | 4910531 | 4.59% | 4876165 |
| chr15 | 5043150 | 4.94% | 5008087 |
| chr16 | 4956474 | 5.49% | 4923129 |
| chr17 | 6606178 | 7.93% | 6559857 |
| chr18 | 3362916 | 4.18% | 3337823 |
| chr19 | 5445001 | 9.29% | 5408645 |
| chr20 | 4039884 | 6.27% | 4012305 |
| chr21 | 1849777 | 3.96% | 1836022 |
| chr22 | 2698156 | 5.31% | 2679996 |
| chrX | 3750946 | 2.40% | 3724242 |
| chrY | 49343 | 0.09% | 46916 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 154453964 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c6__mean_counts_contribs.bw | 957.61 MB | fafa3cbe746dcb22b21ceca5cb750bc6 |
| genomic_resource.yaml | 1.32 KB | 4737399949dff9d447b0750374ca6fd4 |
| statistics/ |
