Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c6/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c6 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c6_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c6_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00278, 17.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 82835600 | 2.58% | 82834647 |
| chr1 | 7869173 | 3.16% | 7869170 |
| chr2 | 6694928 | 2.76% | 6694924 |
| chr3 | 5390358 | 2.72% | 5390355 |
| chr4 | 4118972 | 2.17% | 4118971 |
| chr5 | 4662843 | 2.57% | 4662841 |
| chr6 | 5065396 | 2.97% | 5065394 |
| chr7 | 4174421 | 2.62% | 4174421 |
| chr8 | 3808195 | 2.62% | 3808194 |
| chr9 | 3545528 | 2.56% | 3545528 |
| chr10 | 4231661 | 3.16% | 4231658 |
| chr11 | 4284315 | 3.17% | 4284314 |
| chr12 | 4043636 | 3.03% | 4043635 |
| chr13 | 2080002 | 1.82% | 2080001 |
| chr14 | 2624787 | 2.45% | 2624787 |
| chr15 | 2688928 | 2.64% | 2688927 |
| chr16 | 2643582 | 2.93% | 2643582 |
| chr17 | 3562828 | 4.28% | 3562828 |
| chr18 | 1774516 | 2.21% | 1774516 |
| chr19 | 2983785 | 5.09% | 2983783 |
| chr20 | 2150335 | 3.34% | 2150333 |
| chr21 | 978836 | 2.10% | 978835 |
| chr22 | 1430823 | 2.82% | 1430823 |
| chrX | 2001080 | 1.28% | 2001078 |
| chrY | 26672 | 0.05% | 25749 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 82834647 | 1 | 911 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c6__mean_pred_corrected.bw | 626.46 MB | bc16286b61647f80df60503538647f90 |
| genomic_resource.yaml | 1.28 KB | 8dbd806fe08f9075947a51c468da7089 |
| statistics/ |
