Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c6/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c6_obs_pval_signal float

liu2026Multiomics_Stomach_c6_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c6_obs_pval_signal [0, 3.08e+03]
n
3,087,225,603
mean
0.323
sd
2.68

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308722560396.20% 64101362
chr1 248946462 >99.99% 5948142
chr2 242183502 >99.99% 5123108
chr3 198220313 99.96% 4151275
chr4 190204548 99.99% 3254764
chr5 181476975 99.97% 3476909
chr6 170743532 99.96% 3689150
chr7 159335914 99.99% 3323366
chr8 145076020 99.96% 2828177
chr9 138255509 99.90% 2895538
chr10 133787439 99.99% 3073568
chr11 135076630 99.99% 3451108
chr12 133264935 99.99% 3143418
chr13 114354066 99.99% 1595869
chr14 106883696 99.85% 2024592
chr15 101981162 99.99% 1932399
chr16 90226188 99.88% 2237409
chr17 83247265 99.99% 2980931
chr18 80263246 99.86% 1294482
chr19 58607600 99.98% 2663920
chr20 64333960 99.83% 1657932
chr21 46699979 99.98% 769835
chr22 50808458 99.98% 1353861
chrX 156030838 99.99% 1212625
chrY 57217366 99.98% 18984
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64101362 1 30005694 48.16 11
global segment-length histogram

Files

Filename Size md5
Stomach_c6__obs_pval_signal.bw 369.49 MB e977dded721d1ee619922aba4486e899
genomic_resource.yaml 1.24 KB 6b638f6ec3c0ce5063bb35846b02203e
statistics/