Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c7/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c7 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c7_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c7_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0524, 0.167] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 131387760 | 4.09% | 130490275 |
| chr1 | 13129011 | 5.27% | 13039258 |
| chr2 | 10481414 | 4.33% | 10409315 |
| chr3 | 8552379 | 4.31% | 8492658 |
| chr4 | 6028871 | 3.17% | 5984956 |
| chr5 | 6596229 | 3.63% | 6551053 |
| chr6 | 7681578 | 4.50% | 7628809 |
| chr7 | 6686561 | 4.20% | 6640456 |
| chr8 | 5571368 | 3.84% | 5533234 |
| chr9 | 5755244 | 4.16% | 5717319 |
| chr10 | 6525586 | 4.88% | 6480180 |
| chr11 | 7088990 | 5.25% | 7041288 |
| chr12 | 6625567 | 4.97% | 6581430 |
| chr13 | 3100345 | 2.71% | 3078631 |
| chr14 | 4404738 | 4.11% | 4374588 |
| chr15 | 4397703 | 4.31% | 4367933 |
| chr16 | 4487408 | 4.97% | 4458756 |
| chr17 | 6053264 | 7.27% | 6013299 |
| chr18 | 2571279 | 3.20% | 2551743 |
| chr19 | 5071181 | 8.65% | 5039106 |
| chr20 | 3375873 | 5.24% | 3353635 |
| chr21 | 1361368 | 2.91% | 1352010 |
| chr22 | 2591040 | 5.10% | 2574253 |
| chrX | 3185686 | 2.04% | 3163772 |
| chrY | 65077 | 0.11% | 62593 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 130490275 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c7__mean_counts_contribs.bw | 808.02 MB | 61d5d3857d1ef27fd1a3e583be81d508 |
| genomic_resource.yaml | 1.32 KB | 17635aa7141a341da1a096702083bacb |
| statistics/ |
