Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c7/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c7 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c7_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c7_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00214, 29] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 70110273 | 2.18% | 70109319 |
| chr1 | 7025497 | 2.82% | 7025493 |
| chr2 | 5573662 | 2.30% | 5573660 |
| chr3 | 4526261 | 2.28% | 4526259 |
| chr4 | 3205639 | 1.69% | 3205638 |
| chr5 | 3505965 | 1.93% | 3505965 |
| chr6 | 4105789 | 2.40% | 4105788 |
| chr7 | 3550967 | 2.23% | 3550967 |
| chr8 | 2945766 | 2.03% | 2945765 |
| chr9 | 3083979 | 2.23% | 3083977 |
| chr10 | 3477504 | 2.60% | 3477502 |
| chr11 | 3796527 | 2.81% | 3796525 |
| chr12 | 3551948 | 2.67% | 3551946 |
| chr13 | 1640175 | 1.43% | 1640175 |
| chr14 | 2355672 | 2.20% | 2355671 |
| chr15 | 2336961 | 2.29% | 2336959 |
| chr16 | 2396499 | 2.65% | 2396499 |
| chr17 | 3268010 | 3.93% | 3268009 |
| chr18 | 1355785 | 1.69% | 1355783 |
| chr19 | 2769879 | 4.73% | 2769879 |
| chr20 | 1791450 | 2.78% | 1791450 |
| chr21 | 723908 | 1.55% | 723908 |
| chr22 | 1376766 | 2.71% | 1376766 |
| chrX | 1707323 | 1.09% | 1707323 |
| chrY | 38341 | 0.07% | 37412 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 70109319 | 1 | 910 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c7__mean_pred_corrected.bw | 531.23 MB | 7abe6e05e27184345f2749d49e66b868 |
| genomic_resource.yaml | 1.28 KB | 24fcfbd6d0ae823c754f29b566422a06 |
| statistics/ |
