Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c7/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c7_obs_pval_signal float

liu2026Multiomics_Stomach_c7_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Stomach_c7_obs_pval_signal [0, 3.15e+03]
n
3,087,266,581
mean
0.474
sd
3.37

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308726658196.20% 63053664
chr1 248946456 >99.99% 5862723
chr2 242183500 >99.99% 5047215
chr3 198220523 99.96% 4083776
chr4 190203978 99.99% 3285359
chr5 181477715 99.97% 3307784
chr6 170739740 99.96% 3552206
chr7 159335883 99.99% 3247458
chr8 145075964 99.96% 2715538
chr9 138300490 99.93% 2788464
chr10 133787439 99.99% 3172064
chr11 135076616 99.99% 3325109
chr12 133265010 99.99% 3163270
chr13 114354060 99.99% 1661376
chr14 106883735 99.85% 2147446
chr15 101981157 99.99% 1945987
chr16 90226229 99.88% 2187502
chr17 83247271 99.99% 2844373
chr18 80263248 99.86% 1309928
chr19 58607600 99.98% 2427643
chr20 64333780 99.83% 1537918
chr21 46699959 99.98% 717367
chr22 50808101 99.98% 1275525
chrX 156030768 99.99% 1363997
chrY 57217359 99.98% 83636
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63053664 1 29999417 48.96 14
global segment-length histogram

Files

Filename Size md5
Stomach_c7__obs_pval_signal.bw 362.85 MB f4f73c103934fee48556ec4604d66ac6
genomic_resource.yaml 1.24 KB aa8f54c160738d0fe13c20796cd59648
statistics/