Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c8/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c8
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c8_obs_pval_signal float

liu2026Multiomics_Stomach_c8_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c8_obs_pval_signal [0, 3.96e+03]
n
3,087,279,017
mean
0.43
sd
4.16

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308727901796.20% 66670384
chr1 248946468 >99.99% 6282603
chr2 242183494 >99.99% 5212254
chr3 198220350 99.96% 4189585
chr4 190204555 99.99% 3314987
chr5 181475865 99.97% 3501173
chr6 170740496 99.96% 3751240
chr7 159335901 99.99% 3455692
chr8 145075972 99.96% 2810205
chr9 138313204 99.94% 2971413
chr10 133787445 99.99% 3150330
chr11 135076642 99.99% 3678586
chr12 133264905 99.99% 3282955
chr13 114354206 99.99% 1689471
chr14 106883735 99.85% 2204009
chr15 101981143 99.99% 1980230
chr16 90226279 99.88% 2347779
chr17 83247338 99.99% 3224129
chr18 80263248 99.86% 1366209
chr19 58607600 99.98% 2850390
chr20 64333544 99.83% 1750663
chr21 46699971 99.98% 836880
chr22 50808458 99.98% 1496554
chrX 156030846 99.99% 1300945
chrY 57217352 99.98% 22102
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66670384 1 30002664 46.31 11
global segment-length histogram

Files

Filename Size md5
Stomach_c8__obs_pval_signal.bw 384.5 MB 86fb2d748c488d48e7526e9c281b1a11
genomic_resource.yaml 1.24 KB ff01ca967269449838be4a47c77353ed
statistics/