Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c9/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c9 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c9_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c9_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0668, 0.159] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 159068488 | 4.96% | 158000285 |
| chr1 | 15501895 | 6.23% | 15398679 |
| chr2 | 12562004 | 5.19% | 12476846 |
| chr3 | 9734312 | 4.91% | 9667197 |
| chr4 | 7113444 | 3.74% | 7062632 |
| chr5 | 8566490 | 4.72% | 8507810 |
| chr6 | 8859428 | 5.19% | 8799194 |
| chr7 | 8470281 | 5.32% | 8412428 |
| chr8 | 6979492 | 4.81% | 6932305 |
| chr9 | 6736437 | 4.87% | 6692194 |
| chr10 | 7769735 | 5.81% | 7717779 |
| chr11 | 8863658 | 6.56% | 8806472 |
| chr12 | 8002060 | 6.00% | 7948508 |
| chr13 | 3786548 | 3.31% | 3760321 |
| chr14 | 4958658 | 4.63% | 4925530 |
| chr15 | 5091788 | 4.99% | 5057593 |
| chr16 | 5593222 | 6.19% | 5556651 |
| chr17 | 7606430 | 9.14% | 7555949 |
| chr18 | 3364244 | 4.19% | 3339404 |
| chr19 | 6225391 | 10.62% | 6186434 |
| chr20 | 4608629 | 7.15% | 4578553 |
| chr21 | 1820931 | 3.90% | 1808603 |
| chr22 | 3536626 | 6.96% | 3514099 |
| chrX | 3278955 | 2.10% | 3257506 |
| chrY | 37830 | 0.07% | 37598 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 158000285 | 1 | 996 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c9__mean_counts_contribs.bw | 977.16 MB | a1fab33bdf2867d4b052a208a1a58748 |
| genomic_resource.yaml | 1.32 KB | 043beff89955543ab230d29bda97c46f |
| statistics/ |
