Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c9/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c9_obs_pval_signal float

liu2026Multiomics_Stomach_c9_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c9_obs_pval_signal [0, 3.07e+03]
n
3,087,306,357
mean
0.404
sd
3.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308730635796.20% 82775926
chr1 248946444 >99.99% 7718708
chr2 242183488 >99.99% 6491541
chr3 198220677 99.96% 5271866
chr4 190203801 99.99% 4140823
chr5 181475899 99.97% 4534909
chr6 170744014 99.96% 4540717
chr7 159335914 99.99% 4442060
chr8 145077721 99.96% 3672503
chr9 138334453 99.96% 3629362
chr10 133787447 99.99% 3919816
chr11 135076621 99.99% 4599963
chr12 133264941 99.99% 4111412
chr13 114354053 99.99% 2122436
chr14 106883648 99.85% 2676559
chr15 101981137 99.99% 2456014
chr16 90227753 99.88% 2915485
chr17 83247264 99.99% 3750502
chr18 80263247 99.86% 1840132
chr19 58607600 99.98% 3203016
chr20 64333711 99.83% 2250910
chr21 46699971 99.98% 1016103
chr22 50808349 99.98% 1843546
chrX 156030845 99.99% 1608533
chrY 57217359 99.98% 19010
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 82775926 1 30013155 37.3 10
global segment-length histogram

Files

Filename Size md5
Stomach_c9__obs_pval_signal.bw 478.83 MB ae45aad06755d026d147c01cd26cf6b4
genomic_resource.yaml 1.24 KB 8a826132ec06b1ec8eae532a83d6b761
statistics/