Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c0/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c0 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c0_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c0_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0954, 0.245] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 170124415 | 5.30% | 169239023 |
| chr1 | 16230590 | 6.52% | 16145865 |
| chr2 | 13791927 | 5.69% | 13719781 |
| chr3 | 11211034 | 5.65% | 11150720 |
| chr4 | 6998584 | 3.68% | 6958130 |
| chr5 | 8073753 | 4.45% | 8031241 |
| chr6 | 9889497 | 5.79% | 9838193 |
| chr7 | 8343125 | 5.24% | 8300081 |
| chr8 | 6960778 | 4.80% | 6924382 |
| chr9 | 7078266 | 5.11% | 7040421 |
| chr10 | 8099737 | 6.05% | 8057023 |
| chr11 | 7987104 | 5.91% | 7947434 |
| chr12 | 8651076 | 6.49% | 8606314 |
| chr13 | 4221370 | 3.69% | 4199092 |
| chr14 | 5940688 | 5.55% | 5909683 |
| chr15 | 5662498 | 5.55% | 5633539 |
| chr16 | 6071232 | 6.72% | 6041962 |
| chr17 | 8513508 | 10.23% | 8470065 |
| chr18 | 3331058 | 4.14% | 3311638 |
| chr19 | 7118469 | 12.14% | 7085701 |
| chr20 | 4750176 | 7.37% | 4726945 |
| chr21 | 2234006 | 4.78% | 2222461 |
| chr22 | 3951873 | 7.78% | 3933465 |
| chrX | 5005216 | 3.21% | 4978575 |
| chrY | 8850 | 0.02% | 6312 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 169239023 | 1 | 2508 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c0__mean_counts_contribs.bw | 1.02 GB | fce325e20407a888020005b7085c44cf |
| genomic_resource.yaml | 1.31 KB | 994e7fa9e21be44f578182f4a86f34bd |
| statistics/ |
