Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c1/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c1_obs_pval_signal float

liu2026Multiomics_Thymus_c1_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c1_obs_pval_signal [0, 5.65e+03]
n
3,087,297,529
mean
0.969
sd
17.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729752996.20% 170104758
chr1 248946468 >99.99% 15181516
chr2 242183502 >99.99% 14263370
chr3 198223337 99.96% 11474819
chr4 190204571 99.99% 8453124
chr5 181477753 99.97% 9053115
chr6 170744163 99.96% 9928105
chr7 159335945 99.99% 8825949
chr8 145078351 99.96% 7569178
chr9 138318305 99.94% 7061916
chr10 133787439 99.99% 8127977
chr11 135076642 99.99% 8273589
chr12 133265010 99.99% 8451852
chr13 114354200 99.99% 4670777
chr14 106883752 99.85% 5674290
chr15 101981155 99.99% 5216866
chr16 90228307 99.88% 5790845
chr17 83247366 99.99% 7360147
chr18 80263248 99.86% 3650760
chr19 58607600 99.98% 5777096
chr20 64333786 99.83% 4377058
chr21 46699973 99.98% 2203940
chr22 50808458 99.98% 3584256
chrX 156030839 99.99% 5113175
chrY 57217359 99.98% 21038
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 170104758 1 30014074 18.15 5
global segment-length histogram

Files

Filename Size md5
Thymus_c1__obs_pval_signal.bw 989.02 MB 13fa0515437e95877b486e71e1a5df56
genomic_resource.yaml 1.24 KB eeaf27dfa6bfc6e809e9b430c6343c72
statistics/