Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c10/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c10 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c10_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c10_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0334, 0.0849] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 99555697 | 3.10% | 98641828 |
| chr1 | 9937503 | 3.99% | 9846405 |
| chr2 | 8054014 | 3.33% | 7978655 |
| chr3 | 6291438 | 3.17% | 6231753 |
| chr4 | 4276080 | 2.25% | 4233030 |
| chr5 | 5063961 | 2.79% | 5016720 |
| chr6 | 5731983 | 3.36% | 5678706 |
| chr7 | 4951835 | 3.11% | 4906023 |
| chr8 | 4305957 | 2.97% | 4265987 |
| chr9 | 4276155 | 3.09% | 4237078 |
| chr10 | 4811967 | 3.60% | 4767732 |
| chr11 | 5417298 | 4.01% | 5369098 |
| chr12 | 4967700 | 3.73% | 4922866 |
| chr13 | 2164412 | 1.89% | 2143786 |
| chr14 | 3101771 | 2.90% | 3073611 |
| chr15 | 3320041 | 3.26% | 3289267 |
| chr16 | 3476087 | 3.85% | 3445994 |
| chr17 | 4896766 | 5.88% | 4854082 |
| chr18 | 1861841 | 2.32% | 1842871 |
| chr19 | 4477527 | 7.64% | 4440711 |
| chr20 | 2597554 | 4.03% | 2574172 |
| chr21 | 1067250 | 2.28% | 1057610 |
| chr22 | 2139477 | 4.21% | 2120923 |
| chrX | 2367080 | 1.52% | 2344748 |
| 432 contigs with no values (178243688 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 98641828 | 1 | 968 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c10__mean_counts_contribs.bw | 611.65 MB | fceb7e11c9bcc09fd06895dcadf9bd68 |
| genomic_resource.yaml | 1.32 KB | cebf3333ea9b03454b20f0c365736e0e |
| statistics/ |
