Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c10/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thymus for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c10_mean_pred_corrected float

liu2026Multiomics_Thymus_c10_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Thymus_c10_mean_pred_corrected [0.00115, 5.26]
n
51,336,637
mean
0.0668
sd
0.112

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 513366371.60% 51336624
chr1 5136360 2.06% 5136357
chr2 4133988 1.71% 4133988
chr3 3227130 1.63% 3227129
chr4 2194728 1.15% 2194726
chr5 2597296 1.43% 2597296
chr6 2965990 1.74% 2965989
chr7 2539174 1.59% 2539174
chr8 2212499 1.52% 2212499
chr9 2194590 1.59% 2194590
chr10 2478352 1.85% 2478352
chr11 2808737 2.08% 2808735
chr12 2564555 1.92% 2564554
chr13 1108655 0.97% 1108655
chr14 1604779 1.50% 1604779
chr15 1705375 1.67% 1705375
chr16 1797729 1.99% 1797729
chr17 2555436 3.07% 2555436
chr18 949579 1.18% 949579
chr19 2366591 4.04% 2366590
chr20 1331822 2.07% 1331821
chr21 551950 1.18% 551950
chr22 1090553 2.15% 1090553
chrX 1220769 0.78% 1220768
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51336624 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Thymus_c10__mean_pred_corrected.bw 389.02 MB 814a8b961b63789f0aa568cee6c72381
genomic_resource.yaml 1.28 KB 72be998aca4d16e1cd6803d483ccdb37
statistics/