Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c11/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c11_obs_pval_signal float

liu2026Multiomics_Thymus_c11_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c11_obs_pval_signal [0, 673]
n
3,087,204,936
mean
0.457
sd
2.52

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308720493696.20% 37110633
chr1 248946456 >99.99% 3453990
chr2 242183494 >99.99% 2956327
chr3 198220306 99.96% 2400547
chr4 190204571 99.99% 1650395
chr5 181477739 99.97% 1872711
chr6 170744163 99.96% 2193313
chr7 159335797 99.99% 1877394
chr8 145075452 99.96% 1556534
chr9 138237337 99.89% 1543701
chr10 133787439 99.99% 1756180
chr11 135076081 99.99% 1908104
chr12 133264900 99.99% 1910205
chr13 114353928 99.99% 900682
chr14 106883752 99.85% 1226446
chr15 101981143 99.99% 1181858
chr16 90228307 99.88% 1414549
chr17 83247258 99.99% 1823528
chr18 80263248 99.86% 708169
chr19 58607595 99.98% 1613089
chr20 64329773 99.82% 960903
chr21 46699965 99.98% 448010
chr22 50808344 99.98% 827415
chrX 156030684 99.99% 924042
chrY 57217204 99.98% 2541
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37110633 1 30057228 83.19 16
global segment-length histogram

Files

Filename Size md5
Thymus_c11__obs_pval_signal.bw 219.82 MB df2717adba3edab8ffd11d14a808b898
genomic_resource.yaml 1.24 KB 2b44c7c49b46187e106db4baab630b04
statistics/