Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c12/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c12 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c12_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c12_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0376, 0.122] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 121597724 | 3.79% | 120635239 |
| chr1 | 11684762 | 4.69% | 11592009 |
| chr2 | 9718724 | 4.01% | 9640469 |
| chr3 | 7927373 | 4.00% | 7863004 |
| chr4 | 5088528 | 2.68% | 5045403 |
| chr5 | 6153176 | 3.39% | 6103009 |
| chr6 | 7294045 | 4.27% | 7235330 |
| chr7 | 5919745 | 3.72% | 5873177 |
| chr8 | 5044148 | 3.48% | 5003365 |
| chr9 | 5033087 | 3.64% | 4992178 |
| chr10 | 5990366 | 4.48% | 5943513 |
| chr11 | 6042707 | 4.47% | 5995637 |
| chr12 | 6328355 | 4.75% | 6277788 |
| chr13 | 2848523 | 2.49% | 2825048 |
| chr14 | 4166161 | 3.89% | 4133045 |
| chr15 | 3963459 | 3.89% | 3932291 |
| chr16 | 4280115 | 4.74% | 4248368 |
| chr17 | 6280120 | 7.54% | 6232670 |
| chr18 | 2208899 | 2.75% | 2190872 |
| chr19 | 5345862 | 9.12% | 5307870 |
| chr20 | 3334224 | 5.17% | 3308528 |
| chr21 | 1428554 | 3.06% | 1417347 |
| chr22 | 2585425 | 5.09% | 2566157 |
| chrX | 2931366 | 1.88% | 2908161 |
| 432 contigs with no values (178243688 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 120635239 | 1 | 972 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c12__mean_counts_contribs.bw | 746.78 MB | e9618b838abda94de8dd02bf103f5bd7 |
| genomic_resource.yaml | 1.32 KB | cfc8dc65ceb09f6273948459b267a5d4 |
| statistics/ |
