Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c12/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c12_obs_pval_signal float

liu2026Multiomics_Thymus_c12_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c12_obs_pval_signal [0, 395]
n
3,087,233,705
mean
0.48
sd
1.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308723370596.20% 16771741
chr1 248946118 >99.99% 1607812
chr2 242180203 99.99% 1276730
chr3 198193824 99.95% 1014735
chr4 190204500 99.99% 632276
chr5 181477710 99.97% 773233
chr6 170736828 99.96% 952259
chr7 159335945 99.99% 816863
chr8 145075717 99.96% 653170
chr9 138314065 99.94% 716876
chr10 133787433 99.99% 791396
chr11 135076471 99.99% 885325
chr12 133264897 99.99% 870787
chr13 114353670 99.99% 358720
chr14 106883611 99.85% 569460
chr15 101980879 99.99% 552036
chr16 90215015 99.86% 686825
chr17 83247259 99.99% 976838
chr18 80262993 99.86% 283868
chr19 58607556 99.98% 919907
chr20 64332737 99.83% 467768
chr21 46699946 99.98% 213085
chr22 50808344 99.98% 427844
chrX 156030684 99.99% 323839
chrY 57217300 99.98% 89
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 16771741 1 36245857 184.07 18
global segment-length histogram

Files

Filename Size md5
Thymus_c12__obs_pval_signal.bw 96.99 MB 22e0dd3b929da7f1f977f63d657771e3
genomic_resource.yaml 1.24 KB f68df464383e1c3502228ae863221094
statistics/