Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c13/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c13 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c13_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c13_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0284, 0.0797] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 115164147 | 3.59% | 114008371 |
| chr1 | 10751265 | 4.32% | 10642828 |
| chr2 | 9498664 | 3.92% | 9401840 |
| chr3 | 7714831 | 3.89% | 7635597 |
| chr4 | 5618542 | 2.95% | 5558581 |
| chr5 | 6176699 | 3.40% | 6113684 |
| chr6 | 7047696 | 4.13% | 6976344 |
| chr7 | 5958051 | 3.74% | 5897661 |
| chr8 | 5184051 | 3.57% | 5130735 |
| chr9 | 4848045 | 3.50% | 4798949 |
| chr10 | 5520538 | 4.13% | 5465154 |
| chr11 | 5729939 | 4.24% | 5673752 |
| chr12 | 5844249 | 4.39% | 5785767 |
| chr13 | 3048272 | 2.67% | 3016414 |
| chr14 | 3859806 | 3.61% | 3821357 |
| chr15 | 3617164 | 3.55% | 3581052 |
| chr16 | 3622506 | 4.01% | 3588299 |
| chr17 | 5132242 | 6.16% | 5082891 |
| chr18 | 2262633 | 2.82% | 2238700 |
| chr19 | 4387621 | 7.49% | 4348721 |
| chr20 | 2768849 | 4.30% | 2742073 |
| chr21 | 1376111 | 2.95% | 1362501 |
| chr22 | 2147289 | 4.23% | 2126874 |
| chrX | 3049084 | 1.95% | 3018597 |
| 432 contigs with no values (178243688 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 114008371 | 1 | 952 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c13__mean_counts_contribs.bw | 706.8 MB | 63da6b92b1b2cf6edf09462c8d1e8510 |
| genomic_resource.yaml | 1.32 KB | 6468546600564881ad5aa10da6cd821f |
| statistics/ |
