Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c13/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thymus for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c13_mean_pred_corrected float

liu2026Multiomics_Thymus_c13_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Thymus_c13_mean_pred_corrected [0.0006, 4.03]
n
58,268,256
mean
0.0416
sd
0.0738

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 582682561.82% 58268235
chr1 5448603 2.19% 5448600
chr2 4792120 1.98% 4792120
chr3 3885789 1.96% 3885785
chr4 2820723 1.48% 2820723
chr5 3122917 1.72% 3122916
chr6 3578512 2.10% 3578510
chr7 3002266 1.88% 3002266
chr8 2606256 1.80% 2606254
chr9 2444254 1.77% 2444253
chr10 2788579 2.08% 2788579
chr11 2899054 2.15% 2899052
chr12 2966074 2.23% 2966074
chr13 1530258 1.34% 1530256
chr14 1956701 1.83% 1956701
chr15 1823782 1.79% 1823782
chr16 1838323 2.03% 1838323
chr17 2622445 3.15% 2622445
chr18 1134869 1.41% 1134869
chr19 2285189 3.90% 2285188
chr20 1398961 2.17% 1398959
chr21 697694 1.49% 697693
chr22 1081841 2.13% 1081841
chrX 1543046 0.99% 1543046
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58268235 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Thymus_c13__mean_pred_corrected.bw 440.98 MB 6094ec4bb1a0bdb356735e9f071a76da
genomic_resource.yaml 1.28 KB 312f111770a5b0343b33706b209c2c2c
statistics/