Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c13/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c13_obs_pval_signal float

liu2026Multiomics_Thymus_c13_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c13_obs_pval_signal [1e-05, 298]
n
3,086,574,396
mean
0.582
sd
0.825

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308657439696.18% 10572155
chr1 248946270 >99.99% 1013011
chr2 242183500 >99.99% 821084
chr3 198220306 99.96% 655825
chr4 190203774 99.99% 434014
chr5 181462946 99.96% 514581
chr6 170736675 99.96% 591621
chr7 159335578 99.99% 517544
chr8 145075340 99.96% 418338
chr9 138318305 99.94% 467875
chr10 133787141 99.99% 498686
chr11 135075605 99.99% 566285
chr12 133262514 99.99% 540033
chr13 114353938 99.99% 234449
chr14 106883565 99.85% 356668
chr15 101981155 99.99% 326846
chr16 90208142 99.86% 423729
chr17 83247265 99.99% 573907
chr18 80263240 99.86% 178934
chr19 58607497 99.98% 569564
chr20 64333611 99.83% 275998
chr21 46699326 99.98% 128255
chr22 50808338 99.98% 251122
chrX 155698663 99.78% 213736
chrY 56881702 99.40% 50
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10572155 1 37268131 291.95 26
global segment-length histogram

Files

Filename Size md5
Thymus_c13__obs_pval_signal.bw 61.05 MB eff8c7bf3a998fdce0057c855caebe91
genomic_resource.yaml 1.24 KB 988d71e319d0f00d93f5dd93860df87c
statistics/