Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c14/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c14 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c14_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c14_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0348, 0.0858] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 88168899 | 2.75% | 87317309 |
| chr1 | 8732623 | 3.51% | 8649216 |
| chr2 | 6910179 | 2.85% | 6842686 |
| chr3 | 5657624 | 2.85% | 5601668 |
| chr4 | 3757370 | 1.98% | 3717920 |
| chr5 | 4317690 | 2.38% | 4274935 |
| chr6 | 5015531 | 2.94% | 4965505 |
| chr7 | 4430472 | 2.78% | 4387279 |
| chr8 | 3657385 | 2.52% | 3621819 |
| chr9 | 3829030 | 2.77% | 3792706 |
| chr10 | 4207547 | 3.14% | 4165977 |
| chr11 | 4726436 | 3.50% | 4681753 |
| chr12 | 4228901 | 3.17% | 4188008 |
| chr13 | 1912817 | 1.67% | 1893408 |
| chr14 | 2852282 | 2.66% | 2824710 |
| chr15 | 3060604 | 3.00% | 3030556 |
| chr16 | 3144683 | 3.48% | 3116373 |
| chr17 | 4524630 | 5.43% | 4483055 |
| chr18 | 1654476 | 2.06% | 1637785 |
| chr19 | 4060941 | 6.93% | 4024758 |
| chr20 | 2241586 | 3.48% | 2220426 |
| chr21 | 1023905 | 2.19% | 1014056 |
| chr22 | 2113226 | 4.16% | 2093994 |
| chrX | 2108961 | 1.35% | 2088716 |
| 432 contigs with no values (178243688 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 87317309 | 1 | 937 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c14__mean_counts_contribs.bw | 540.93 MB | 4782f25a7bc4891ac5e9d2fb164e1369 |
| genomic_resource.yaml | 1.32 KB | c5667a2bb948143517514598b560175e |
| statistics/ |
