Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c15/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c15 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c15_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c15_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0274, 0.0927] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 85389385 | 2.66% | 84648420 |
| chr1 | 8188348 | 3.29% | 8117370 |
| chr2 | 6854828 | 2.83% | 6794568 |
| chr3 | 5451508 | 2.75% | 5402370 |
| chr4 | 3502324 | 1.84% | 3470673 |
| chr5 | 4264668 | 2.35% | 4227008 |
| chr6 | 5260120 | 3.08% | 5213779 |
| chr7 | 4295306 | 2.70% | 4257731 |
| chr8 | 3522532 | 2.43% | 3491290 |
| chr9 | 3461830 | 2.50% | 3431795 |
| chr10 | 4014499 | 3.00% | 3979606 |
| chr11 | 4182235 | 3.10% | 4146373 |
| chr12 | 4346776 | 3.26% | 4308827 |
| chr13 | 1996193 | 1.75% | 1978103 |
| chr14 | 2887992 | 2.70% | 2863047 |
| chr15 | 2699975 | 2.65% | 2676870 |
| chr16 | 3045450 | 3.37% | 3020758 |
| chr17 | 4309888 | 5.18% | 4273446 |
| chr18 | 1603827 | 2.00% | 1589417 |
| chr19 | 4110929 | 7.01% | 4078201 |
| chr20 | 2267700 | 3.52% | 2248375 |
| chr21 | 984470 | 2.11% | 976110 |
| chr22 | 1916263 | 3.77% | 1900259 |
| chrX | 2221724 | 1.42% | 2202444 |
| 432 contigs with no values (178243688 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 84648420 | 1 | 790 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c15__mean_counts_contribs.bw | 524.69 MB | 0465caa2057d9a322faa31e4ed913e77 |
| genomic_resource.yaml | 1.32 KB | bafe1a7631b377a03b81e7ef60a734db |
| statistics/ |
