Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c17/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c17 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c17_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c17_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0304, 0.0809] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 70287137 | 2.19% | 69395490 |
| chr1 | 8530005 | 3.43% | 8419754 |
| chr2 | 4344539 | 1.79% | 4290068 |
| chr3 | 3701910 | 1.87% | 3654605 |
| chr4 | 2567229 | 1.35% | 2533597 |
| chr5 | 3015157 | 1.66% | 2976778 |
| chr6 | 3377451 | 1.98% | 3335406 |
| chr7 | 2892380 | 1.82% | 2856731 |
| chr8 | 2355994 | 1.62% | 2325971 |
| chr9 | 2411218 | 1.74% | 2381766 |
| chr10 | 5313204 | 3.97% | 5242575 |
| chr11 | 5386624 | 3.99% | 5315066 |
| chr12 | 5470802 | 4.10% | 5397116 |
| chr13 | 3447442 | 3.01% | 3399071 |
| chr14 | 2078644 | 1.94% | 2052587 |
| chr15 | 1798687 | 1.76% | 1776926 |
| chr16 | 2085519 | 2.31% | 2061808 |
| chr17 | 2779230 | 3.34% | 2747382 |
| chr18 | 999168 | 1.24% | 986327 |
| chr19 | 2870179 | 4.90% | 2839246 |
| chr20 | 1413247 | 2.19% | 1396467 |
| chr21 | 702391 | 1.50% | 693637 |
| chr22 | 1154067 | 2.27% | 1140852 |
| chrX | 1592050 | 1.02% | 1571754 |
| 432 contigs with no values (178243688 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 69395490 | 1 | 24 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c17__mean_counts_contribs.bw | 430.58 MB | 89297c601ac152225888b8dd7098df03 |
| genomic_resource.yaml | 1.32 KB | ccf1d7d970cb4fc6578f0d920448df2a |
| statistics/ |
