Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c2/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c2 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c2_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c2_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0872, 0.259] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 196064248 | 6.11% | 195203459 |
| chr1 | 18622133 | 7.48% | 18540332 |
| chr2 | 16213724 | 6.69% | 16143281 |
| chr3 | 13076534 | 6.59% | 13017767 |
| chr4 | 8426131 | 4.43% | 8385808 |
| chr5 | 9593324 | 5.28% | 9550196 |
| chr6 | 11566571 | 6.77% | 11516405 |
| chr7 | 9595169 | 6.02% | 9553418 |
| chr8 | 8250730 | 5.68% | 8214440 |
| chr9 | 8027609 | 5.80% | 7990913 |
| chr10 | 9525664 | 7.12% | 9483622 |
| chr11 | 9144463 | 6.77% | 9106085 |
| chr12 | 9833526 | 7.38% | 9790640 |
| chr13 | 4987451 | 4.36% | 4964760 |
| chr14 | 6876928 | 6.42% | 6846810 |
| chr15 | 6500630 | 6.37% | 6472451 |
| chr16 | 6775092 | 7.50% | 6747537 |
| chr17 | 9337789 | 11.22% | 9297451 |
| chr18 | 4081871 | 5.08% | 4061835 |
| chr19 | 7698325 | 13.13% | 7667936 |
| chr20 | 5360243 | 8.32% | 5338062 |
| chr21 | 2537713 | 5.43% | 2526422 |
| chr22 | 4530072 | 8.91% | 4511802 |
| chrX | 5495821 | 3.52% | 5471274 |
| chrY | 6735 | 0.01% | 4212 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 195203459 | 1 | 2507 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c2__mean_counts_contribs.bw | 1.18 GB | 6ceecc2b0bb9784124731d66573b7839 |
| genomic_resource.yaml | 1.31 KB | dc3feaf881ece96e06185db257039a99 |
| statistics/ |
