Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c2/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c2_obs_pval_signal float

liu2026Multiomics_Thymus_c2_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Thymus_c2_obs_pval_signal [0, 5.52e+03]
n
3,087,297,424
mean
0.886
sd
15.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729742496.20% 171959486
chr1 248946468 >99.99% 15307191
chr2 242183500 >99.99% 14099867
chr3 198232667 99.97% 11651808
chr4 190204548 99.99% 8417637
chr5 181477763 99.97% 9096279
chr6 170744307 99.96% 9679694
chr7 159335945 99.99% 8855557
chr8 145077399 99.96% 7506089
chr9 138309983 99.94% 7194997
chr10 133787445 99.99% 8241800
chr11 135076642 99.99% 8289031
chr12 133265011 99.99% 8472454
chr13 114354193 99.99% 4713634
chr14 106883741 99.85% 5755179
chr15 101981162 99.99% 5380190
chr16 90228290 99.88% 6058974
chr17 83247372 99.99% 7422921
chr18 80263247 99.86% 3816979
chr19 58607600 99.98% 5947134
chr20 64333622 99.83% 4509790
chr21 46699965 99.98% 2242798
chr22 50808344 99.98% 3746891
chrX 156030844 99.99% 5547922
chrY 57217366 99.98% 4670
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 171959486 1 30053188 17.95 6
global segment-length histogram

Files

Filename Size md5
Thymus_c2__obs_pval_signal.bw 993.06 MB eff01c31369ad4020653636b67697fec
genomic_resource.yaml 1.24 KB baee5c608cfc7587b50f32596e371e93
statistics/