Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c3/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c3_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c3_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0865, 0.248] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 192358204 | 5.99% | 191345724 |
| chr1 | 18569569 | 7.46% | 18472155 |
| chr2 | 15757982 | 6.51% | 15674880 |
| chr3 | 12497560 | 6.30% | 12430874 |
| chr4 | 9047483 | 4.76% | 8996490 |
| chr5 | 9860900 | 5.43% | 9809321 |
| chr6 | 10994015 | 6.44% | 10936092 |
| chr7 | 9750794 | 6.12% | 9697738 |
| chr8 | 8368366 | 5.77% | 8324471 |
| chr9 | 8315650 | 6.01% | 8272555 |
| chr10 | 9665469 | 7.22% | 9614683 |
| chr11 | 10225634 | 7.57% | 10173730 |
| chr12 | 9110573 | 6.84% | 9063277 |
| chr13 | 4471039 | 3.91% | 4446891 |
| chr14 | 6148211 | 5.74% | 6116559 |
| chr15 | 6441592 | 6.32% | 6407594 |
| chr16 | 6404083 | 7.09% | 6371027 |
| chr17 | 8956637 | 10.76% | 8910808 |
| chr18 | 3933406 | 4.89% | 3910982 |
| chr19 | 7052857 | 12.03% | 7016832 |
| chr20 | 5229923 | 8.12% | 5203246 |
| chr21 | 2362762 | 5.06% | 2349641 |
| chr22 | 4322363 | 8.51% | 4300467 |
| chrX | 4867108 | 3.12% | 4841204 |
| chrY | 4228 | 0.01% | 4207 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 191345724 | 1 | 985 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c3__mean_counts_contribs.bw | 1.16 GB | a28dd37aed0af215380eeb2c850e7465 |
| genomic_resource.yaml | 1.31 KB | b8836b1a5c9bd9b859414d108e451f41 |
| statistics/ |
