Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c3/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c3_obs_pval_signal float

liu2026Multiomics_Thymus_c3_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c3_obs_pval_signal [0, 2.41e+03]
n
3,087,277,977
mean
0.554
sd
7.05

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308727797796.20% 70626856
chr1 248946468 >99.99% 6528968
chr2 242183502 >99.99% 5857601
chr3 198220593 99.96% 4615208
chr4 190204548 99.99% 3649296
chr5 181477746 99.97% 3761591
chr6 170739919 99.96% 3955487
chr7 159335931 99.99% 3621655
chr8 145078460 99.96% 3058413
chr9 138309482 99.94% 2977627
chr10 133787440 99.99% 3413231
chr11 135076601 99.99% 3663496
chr12 133265010 99.99% 3305206
chr13 114354005 99.99% 1767883
chr14 106883648 99.85% 2370878
chr15 101981162 99.99% 2143649
chr16 90225521 99.88% 2416093
chr17 83247368 99.99% 3196295
chr18 80263248 99.86% 1494440
chr19 58607600 99.98% 2674319
chr20 64333204 99.83% 1738865
chr21 46699960 99.98% 864940
chr22 50808349 99.98% 1574039
chrX 156030846 99.99% 1968206
chrY 57217366 99.98% 9470
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70626856 1 30005601 43.71 10
global segment-length histogram

Files

Filename Size md5
Thymus_c3__obs_pval_signal.bw 417.18 MB b0a06b6ff77d9775593aac3c63660f4c
genomic_resource.yaml 1.24 KB b6a9ad49b0864b90225f8ceb86717f49
statistics/