Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c4/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c4_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c4_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0399, 0.122] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 142005214 | 4.42% | 140851489 |
| chr1 | 13904503 | 5.59% | 13793292 |
| chr2 | 11553081 | 4.77% | 11457652 |
| chr3 | 9024894 | 4.55% | 8948087 |
| chr4 | 6244057 | 3.28% | 6187426 |
| chr5 | 7133857 | 3.93% | 7074329 |
| chr6 | 8231449 | 4.82% | 8162997 |
| chr7 | 7055207 | 4.43% | 6997549 |
| chr8 | 6066796 | 4.18% | 6016048 |
| chr9 | 6065581 | 4.38% | 6016960 |
| chr10 | 6996006 | 5.23% | 6939468 |
| chr11 | 7495963 | 5.55% | 7437663 |
| chr12 | 6976918 | 5.23% | 6920266 |
| chr13 | 3247971 | 2.84% | 3220394 |
| chr14 | 4673960 | 4.37% | 4636187 |
| chr15 | 4754742 | 4.66% | 4715949 |
| chr16 | 4877425 | 5.40% | 4841173 |
| chr17 | 6890462 | 8.28% | 6838312 |
| chr18 | 2687556 | 3.34% | 2663503 |
| chr19 | 5995065 | 10.23% | 5952658 |
| chr20 | 3832549 | 5.95% | 3802865 |
| chr21 | 1700363 | 3.64% | 1684794 |
| chr22 | 3273763 | 6.44% | 3249447 |
| chrX | 3297580 | 2.11% | 3271253 |
| chrY | 25466 | 0.04% | 23217 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 140851489 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c4__mean_counts_contribs.bw | 871.61 MB | 09b7da85cdcc56a049c1965c64e33a44 |
| genomic_resource.yaml | 1.31 KB | 22b7d3a5e326ff72ae98b62b59fed7a8 |
| statistics/ |
