Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c4/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c4_obs_pval_signal float

liu2026Multiomics_Thymus_c4_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c4_obs_pval_signal [0, 3.53e+03]
n
3,087,227,431
mean
0.401
sd
2.87

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308722743196.20% 42775690
chr1 248946468 >99.99% 3971055
chr2 242183500 >99.99% 3455508
chr3 198220583 99.96% 2734521
chr4 190204106 99.99% 2011833
chr5 181477761 99.97% 2204146
chr6 170744307 99.96% 2404951
chr7 159335940 99.99% 2186238
chr8 145078530 99.96% 1800199
chr9 138251729 99.90% 1807927
chr10 133787439 99.99% 2042240
chr11 135076593 99.99% 2291527
chr12 133264949 99.99% 2090069
chr13 114354066 99.99% 1019699
chr14 106883676 99.85% 1424195
chr15 101981155 99.99% 1303012
chr16 90228293 99.88% 1577175
chr17 83247265 99.99% 2091114
chr18 80263247 99.86% 847348
chr19 58607600 99.98% 1886355
chr20 64333667 99.83% 1109037
chr21 46699953 99.98% 518862
chr22 50808458 99.98% 991574
chrX 156030846 99.99% 1003932
chrY 57217300 99.98% 3173
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42775690 1 30014254 72.17 16
global segment-length histogram

Files

Filename Size md5
Thymus_c4__obs_pval_signal.bw 243.15 MB 7fd552b66860bcb3f26961862472e23f
genomic_resource.yaml 1.24 KB a44206ccb4067847fa79bf0517fd542a
statistics/