Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c5/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c5_obs_pval_signal float

liu2026Multiomics_Thymus_c5_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c5_obs_pval_signal [0, 2.88e+03]
n
3,087,296,736
mean
0.478
sd
3.21

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729673696.20% 76933658
chr1 248946462 >99.99% 6858653
chr2 242183500 >99.99% 6382487
chr3 198232713 99.97% 5086586
chr4 190204096 99.99% 4169453
chr5 181477618 99.97% 4459984
chr6 170739863 99.96% 4467106
chr7 159335830 99.99% 4090001
chr8 145078530 99.96% 3574316
chr9 138314065 99.94% 3275837
chr10 133787439 99.99% 3733913
chr11 135076599 99.99% 3975139
chr12 133265011 99.99% 3699183
chr13 114354030 99.99% 2084478
chr14 106883648 99.85% 2450646
chr15 101981155 99.99% 2232893
chr16 90227692 99.88% 2464190
chr17 83247391 99.99% 3084063
chr18 80263246 99.86% 1646493
chr19 58607600 99.98% 2659206
chr20 64333667 99.83% 1809857
chr21 46699914 99.98% 903346
chr22 50808458 99.98% 1403728
chrX 156030844 99.99% 2414329
chrY 57217365 99.98% 7771
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 76933658 1 30025532 40.13 14
global segment-length histogram

Files

Filename Size md5
Thymus_c5__obs_pval_signal.bw 438.96 MB 6e7a161bbe60f9b458606bd4dc034137
genomic_resource.yaml 1.24 KB 289c9aecc31c2404bb313725174e1d3e
statistics/