Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c7/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c7_obs_pval_signal float

liu2026Multiomics_Thymus_c7_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c7_obs_pval_signal [0, 1.44e+03]
n
3,087,269,934
mean
0.4
sd
2.06

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308726993496.20% 30743287
chr1 248946468 >99.99% 2915035
chr2 242183501 >99.99% 2412564
chr3 198220537 99.96% 1967116
chr4 190203824 99.99% 1349116
chr5 181477742 99.97% 1568997
chr6 170739919 99.96% 1719350
chr7 159335919 99.99% 1556163
chr8 145078486 99.96% 1273070
chr9 138300484 99.93% 1289233
chr10 133787439 99.99% 1441168
chr11 135076616 99.99% 1638878
chr12 133265010 99.99% 1510114
chr13 114354066 99.99% 748117
chr14 106883696 99.85% 1018554
chr15 101981149 99.99% 959013
chr16 90226306 99.88% 1155289
chr17 83247283 99.99% 1573128
chr18 80263246 99.86% 604847
chr19 58607600 99.98% 1447935
chr20 64334035 99.83% 825156
chr21 46699953 99.98% 363612
chr22 50808458 99.98% 734260
chrX 156030832 99.99% 671654
chrY 57217365 99.98% 918
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30743287 1 30241827 100.42 18
global segment-length histogram

Files

Filename Size md5
Thymus_c7__obs_pval_signal.bw 176.08 MB 6057d26b90a4535ea2b154b5d76bbc06
genomic_resource.yaml 1.24 KB ebc5a04c8a02b62ae1430d1e73c8013c
statistics/