Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c8/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c8 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c8_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c8_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0699, 0.159] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 100038860 | 3.12% | 99310204 |
| chr1 | 9825295 | 3.95% | 9753857 |
| chr2 | 7845056 | 3.24% | 7787958 |
| chr3 | 6254596 | 3.15% | 6207670 |
| chr4 | 4128006 | 2.17% | 4094322 |
| chr5 | 4856184 | 2.68% | 4820259 |
| chr6 | 5601794 | 3.28% | 5560436 |
| chr7 | 5052035 | 3.17% | 5014764 |
| chr8 | 4079557 | 2.81% | 4049809 |
| chr9 | 4560197 | 3.30% | 4527797 |
| chr10 | 4886774 | 3.65% | 4851949 |
| chr11 | 5587301 | 4.14% | 5548172 |
| chr12 | 4937229 | 3.70% | 4900873 |
| chr13 | 2306715 | 2.02% | 2289432 |
| chr14 | 3249054 | 3.04% | 3225131 |
| chr15 | 3362729 | 3.30% | 3337896 |
| chr16 | 3515623 | 3.89% | 3491946 |
| chr17 | 4960848 | 5.96% | 4926245 |
| chr18 | 1808917 | 2.25% | 1795504 |
| chr19 | 4531087 | 7.73% | 4500583 |
| chr20 | 2803387 | 4.35% | 2783395 |
| chr21 | 1155321 | 2.47% | 1146858 |
| chr22 | 2289003 | 4.50% | 2273401 |
| chrX | 2440038 | 1.56% | 2421946 |
| chrY | 2114 | <0.01% | 1 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 99310204 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c8__mean_counts_contribs.bw | 615.4 MB | 6d46f2a37946723afb5864c8f6cd1981 |
| genomic_resource.yaml | 1.31 KB | 4734d6fbafcdeb7c19cb1576b6c2240b |
| statistics/ |
