Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c9/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thymus for cell cluster c9 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thymus_c9_mean_counts_contribs | float |
liu2026Multiomics_Thymus_c9_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0293, 0.0816] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 91904959 | 2.86% | 91042299 |
| chr1 | 9329205 | 3.75% | 9242567 |
| chr2 | 7243956 | 2.99% | 7174218 |
| chr3 | 5565493 | 2.81% | 5511883 |
| chr4 | 3827493 | 2.01% | 3788579 |
| chr5 | 4440287 | 2.45% | 4397551 |
| chr6 | 5211350 | 3.05% | 5160929 |
| chr7 | 4449948 | 2.79% | 4407892 |
| chr8 | 3786051 | 2.61% | 3749709 |
| chr9 | 3993340 | 2.89% | 3956331 |
| chr10 | 4295241 | 3.21% | 4254807 |
| chr11 | 5115948 | 3.79% | 5069124 |
| chr12 | 4567444 | 3.43% | 4524330 |
| chr13 | 1958901 | 1.71% | 1939625 |
| chr14 | 3001696 | 2.80% | 2973849 |
| chr15 | 3052540 | 2.99% | 3023279 |
| chr16 | 3342101 | 3.70% | 3312505 |
| chr17 | 4759271 | 5.72% | 4716933 |
| chr18 | 1657921 | 2.06% | 1640889 |
| chr19 | 4607415 | 7.86% | 4568643 |
| chr20 | 2446235 | 3.80% | 2423679 |
| chr21 | 1058302 | 2.27% | 1048325 |
| chr22 | 2185846 | 4.30% | 2166288 |
| chrX | 2008975 | 1.29% | 1990364 |
| 432 contigs with no values (178243688 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 91042299 | 1 | 959 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thymus_c9__mean_counts_contribs.bw | 563.58 MB | 3212c70b3ca297d0357e6df459b4334b |
| genomic_resource.yaml | 1.31 KB | f07e393dae92c5c9404c9a7df192a6cb |
| statistics/ |
