Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thymus/c9/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thymus for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Thymus_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thymus
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thymus_c9_obs_pval_signal float

liu2026Multiomics_Thymus_c9_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thymus_c9_obs_pval_signal [0, 1.13e+03]
n
3,087,206,365
mean
0.349
sd
1.29

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308720636596.20% 31376872
chr1 248946462 >99.99% 2950710
chr2 242183403 >99.99% 2467978
chr3 198220598 99.96% 1965154
chr4 190204096 99.99% 1423647
chr5 181477037 99.97% 1553428
chr6 170741942 99.96% 1767488
chr7 159335837 99.99% 1590713
chr8 145078351 99.96% 1361424
chr9 138237367 99.89% 1364560
chr10 133787434 99.99% 1463165
chr11 135076531 99.99% 1700837
chr12 133264816 99.99% 1585442
chr13 114353728 99.99% 724437
chr14 106883484 99.85% 1056494
chr15 101981107 99.99% 980063
chr16 90225786 99.88% 1177804
chr17 83247258 99.99% 1558635
chr18 80263248 99.86% 634010
chr19 58607600 99.98% 1449705
chr20 64333754 99.83% 845783
chr21 46699922 99.98% 385413
chr22 50808458 99.98% 720144
chrX 156030846 99.99% 649077
chrY 57217300 99.98% 761
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 31376872 1 30324744 98.39 20
global segment-length histogram

Files

Filename Size md5
Thymus_c9__obs_pval_signal.bw 179.0 MB 34bc71d12fe10b253aec13b6fbcf9cef
genomic_resource.yaml 1.24 KB 69b28b696a58d70ba6a27fcde583dd78
statistics/