Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c0/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thyroid for cell cluster c0 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thyroid_c0_mean_counts_contribs | float |
liu2026Multiomics_Thyroid_c0_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0262, 0.109] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 117552467 | 3.66% | 116494840 |
| chr1 | 11345756 | 4.56% | 11244635 |
| chr2 | 9428291 | 3.89% | 9343485 |
| chr3 | 7456925 | 3.76% | 7388405 |
| chr4 | 5494513 | 2.89% | 5440639 |
| chr5 | 6123431 | 3.37% | 6067624 |
| chr6 | 6810957 | 3.99% | 6749243 |
| chr7 | 5934908 | 3.72% | 5880057 |
| chr8 | 5120025 | 3.53% | 5073747 |
| chr9 | 5219929 | 3.77% | 5173070 |
| chr10 | 5688581 | 4.25% | 5637778 |
| chr11 | 6226133 | 4.61% | 6170654 |
| chr12 | 5668440 | 4.25% | 5617516 |
| chr13 | 2892426 | 2.53% | 2864956 |
| chr14 | 3800692 | 3.55% | 3767187 |
| chr15 | 3903123 | 3.83% | 3868256 |
| chr16 | 4136762 | 4.58% | 4101784 |
| chr17 | 5449152 | 6.54% | 5402889 |
| chr18 | 2447153 | 3.04% | 2422914 |
| chr19 | 4731779 | 8.07% | 4693433 |
| chr20 | 3152710 | 4.89% | 3125339 |
| chr21 | 1288166 | 2.76% | 1276233 |
| chr22 | 2365481 | 4.65% | 2345381 |
| chrX | 2843096 | 1.82% | 2817874 |
| chrY | 24038 | 0.04% | 21741 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 116494840 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thyroid_c0__mean_counts_contribs.bw | 721.96 MB | eca70c3e392b045f998ec71f9ec9e125 |
| genomic_resource.yaml | 1.32 KB | 6d11f1b0e46902bbca54304146fdebe0 |
| statistics/ |
