Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c0/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thyroid for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c0_mean_pred_corrected float

liu2026Multiomics_Thyroid_c0_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Thyroid_c0_mean_pred_corrected [0.00136, 8.35]
n
60,343,407
mean
0.0782
sd
0.148

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 603434071.88% 60342469
chr1 5841658 2.35% 5841657
chr2 4827369 1.99% 4827366
chr3 3802677 1.92% 3802675
chr4 2805067 1.47% 2805065
chr5 3124929 1.72% 3124928
chr6 3518642 2.06% 3518641
chr7 3021142 1.90% 3021142
chr8 2617838 1.80% 2617838
chr9 2672887 1.93% 2672887
chr10 2910867 2.18% 2910867
chr11 3197638 2.37% 3197638
chr12 2912847 2.19% 2912846
chr13 1469091 1.28% 1469091
chr14 1961194 1.83% 1961193
chr15 2004094 1.96% 2004094
chr16 2126372 2.35% 2126372
chr17 2827210 3.40% 2827209
chr18 1240218 1.54% 1240218
chr19 2494645 4.26% 2494645
chr20 1616872 2.51% 1616871
chr21 661327 1.42% 661327
chr22 1212347 2.39% 1212347
chrX 1464692 0.94% 1464692
chrY 11784 0.02% 10860
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60342469 1 911 1 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c0__mean_pred_corrected.bw 457.65 MB 24b61d0ee0c0b182e7bce255108f415f
genomic_resource.yaml 1.28 KB f41c722b78aaff94936be9aad85bf4a7
statistics/