Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c1/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thyroid for cell cluster c1 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thyroid_c1_mean_counts_contribs | float |
liu2026Multiomics_Thyroid_c1_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0346, 0.123] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 131921757 | 4.11% | 130794817 |
| chr1 | 12472791 | 5.01% | 12367420 |
| chr2 | 10697566 | 4.42% | 10604537 |
| chr3 | 8438381 | 4.26% | 8364166 |
| chr4 | 6243262 | 3.28% | 6184926 |
| chr5 | 6948669 | 3.83% | 6887436 |
| chr6 | 7816176 | 4.58% | 7747947 |
| chr7 | 6771047 | 4.25% | 6712003 |
| chr8 | 5855828 | 4.03% | 5805378 |
| chr9 | 5727061 | 4.14% | 5679002 |
| chr10 | 6518547 | 4.87% | 6463287 |
| chr11 | 6942492 | 5.14% | 6884682 |
| chr12 | 6390706 | 4.80% | 6335510 |
| chr13 | 3220163 | 2.82% | 3191135 |
| chr14 | 4224137 | 3.95% | 4188710 |
| chr15 | 4258779 | 4.18% | 4222376 |
| chr16 | 4586200 | 5.08% | 4550269 |
| chr17 | 5935577 | 7.13% | 5888701 |
| chr18 | 2840268 | 3.53% | 2813384 |
| chr19 | 5024526 | 8.57% | 4987007 |
| chr20 | 3536868 | 5.49% | 3508029 |
| chr21 | 1522436 | 3.26% | 1509269 |
| chr22 | 2679796 | 5.27% | 2658800 |
| chrX | 3231138 | 2.07% | 3203919 |
| chrY | 39343 | 0.07% | 36924 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 130794817 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thyroid_c1__mean_counts_contribs.bw | 810.51 MB | 0000ece93e8081a25756c1f0b00b8e7f |
| genomic_resource.yaml | 1.32 KB | 64ff0f76f61292616d4d69a7ee60dea0 |
| statistics/ |
