Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c1/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thyroid for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c1_mean_pred_corrected float

liu2026Multiomics_Thyroid_c1_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Thyroid_c1_mean_pred_corrected [0.00162, 11.5]
n
67,837,678
mean
0.0915
sd
0.188

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 678376782.11% 67836718
chr1 6431362 2.58% 6431361
chr2 5480555 2.26% 5480555
chr3 4321976 2.18% 4321972
chr4 3188559 1.68% 3188559
chr5 3553409 1.96% 3553407
chr6 4029304 2.36% 4029302
chr7 3449654 2.16% 3449653
chr8 3001708 2.07% 3001707
chr9 2947880 2.13% 2947878
chr10 3346898 2.50% 3346896
chr11 3573448 2.65% 3573448
chr12 3282929 2.46% 3282928
chr13 1635891 1.43% 1635891
chr14 2179255 2.04% 2179255
chr15 2193039 2.15% 2193038
chr16 2375870 2.63% 2375869
chr17 3087796 3.71% 3087795
chr18 1446684 1.80% 1446684
chr19 2656552 4.53% 2656551
chr20 1815076 2.82% 1815076
chr21 781535 1.67% 781535
chr22 1375801 2.71% 1375801
chrX 1663206 1.07% 1663204
chrY 19291 0.03% 18353
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 67836718 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c1__mean_pred_corrected.bw 514.37 MB db416992139e4d1f8e5b03bdbfe195aa
genomic_resource.yaml 1.28 KB eab2ead4164dacc04adb47a029c5adfd
statistics/